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Bug 1388561

Summary: [openmpi] FTBFS due missing atomics
Product: [Fedora] Fedora Reporter: Dan Horák <dan>
Component: openmpiAssignee: Doug Ledford <dledford>
Status: CLOSED ERRATA QA Contact: Fedora Extras Quality Assurance <extras-qa>
Severity: unspecified Docs Contact:
Priority: unspecified    
Version: 26CC: dakingun, dledford, orion
Target Milestone: ---   
Target Release: ---   
Hardware: ppc64   
OS: Unspecified   
Whiteboard:
Fixed In Version: openmpi-2.0.2-1.fc26 Doc Type: If docs needed, set a value
Doc Text:
Story Points: ---
Clone Of: Environment:
Last Closed: 2018-05-03 16:17:05 UTC Type: Bug
Regression: --- Mount Type: ---
Documentation: --- CRM:
Verified Versions: Category: ---
oVirt Team: --- RHEL 7.3 requirements from Atomic Host:
Cloudforms Team: --- Target Upstream Version:
Embargoed:
Bug Depends On:    
Bug Blocks: 1071880    

Description Dan Horák 2016-10-25 16:24:13 UTC
both ppc64 and ppc64le builds fail with 

...
../../../opal/threads/thread_usage.h:173:1: note: in expansion of macro 'OPAL_THREAD_DEFINE_ATOMIC_SWAP'
 OPAL_THREAD_DEFINE_ATOMIC_SWAP(int64_t, int64_t, 64)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ../../../opal/include/opal/sys/atomic.h:615:0,
                 from ../../../opal/threads/thread_usage.h:28,
                 from ../../../opal/class/opal_object.h:128,
                 from ../../../ompi/errhandler/errhandler.h:32,
                 from intercepts.cc:27:
../../../opal/class/opal_lifo.h: In function 'opal_list_item_t* opal_lifo_pop_atomic(opal_lifo_t*)':
../../../opal/include/opal/sys/atomic_impl.h:288:77: error: 'opal_atomic_ll_64' was not declared in this scope
 #define opal_atomic_ll_ptr(addr) (void *) opal_atomic_ll_64((int64_t *) addr)
                                                                             ^
../../../opal/class/opal_lifo.h:214:37: note: in expansion of macro 'opal_atomic_ll_ptr'
         item = (opal_list_item_t *) opal_atomic_ll_ptr (&lifo->opal_lifo_head.data.item);
                                     ^~~~~~~~~~~~~~~~~~
../../../opal/include/opal/sys/atomic_impl.h:289:94: error: 'opal_atomic_sc_64' was not declared in this scope
 #define opal_atomic_sc_ptr(addr, newval) opal_atomic_sc_64((int64_t *) addr, (int64_t) newval)
                                                                                              ^
../../../opal/class/opal_lifo.h:220:15: note: in expansion of macro 'opal_atomic_sc_ptr'
     } while (!opal_atomic_sc_ptr (&lifo->opal_lifo_head.data.item, next));
               ^~~~~~~~~~~~~~~~~~
In file included from ../../../ompi/request/request.h:38:0,
                 from ../../../ompi/communicator/comm_request.h:17,
                 from ../../../ompi/communicator/communicator.h:35,
                 from intercepts.cc:28:
../../../opal/threads/wait_sync.h: In function 'void wait_sync_update(ompi_wait_sync_t*, int, int)':
../../../opal/threads/wait_sync.h:114:45: error: 'opal_atomic_swap_32' was not declared in this scope
         opal_atomic_swap_32 (&sync->count, 0);
                                             ^
make[2]: Leaving directory '/builddir/build/BUILD/openmpi-2.0.1/ompi/mpi/cxx'
make[2]: *** [Makefile:1807: intercepts.lo] Error 1
make[1]: Leaving directory '/builddir/build/BUILD/openmpi-2.0.1/ompi'
make[1]: *** [Makefile:3324: all-recursive] Error 1
make: *** [Makefile:1800: all-recursive] Error 1
RPM build errors:
error: Bad exit status from /var/tmp/rpm-tmp.hAxc5H (%build)
    Bad exit status from /var/tmp/rpm-tmp.hAxc5H (%build)
Child return code was: 1
...


for full logs please see http://ppc.koji.fedoraproject.org/koji/taskinfo?taskID=3837392

Version-Release number of selected component (if applicable):
openmpi-2.0.1-1.fc26

Comment 1 Orion Poplawski 2016-10-25 20:26:53 UTC
This looks like it will be fixed in 2.0.2.  See upstream bug https://github.com/open-mpi/ompi/issues/2055

Comment 2 Dan Horák 2016-10-26 20:23:29 UTC
Thanks for the pointer, I'll try to backport the upstream patches tomorrow, ppc koji is going to be merged with primary koji this week and due the missing openmpi we are few days behind ...

Comment 3 Dan Horák 2016-10-27 07:14:49 UTC
Temporarily disabled the C++ bindings for ppc, see https://github.com/open-mpi/ompi/issues/2055#issuecomment-256487077

Comment 4 Fedora End Of Life 2017-02-28 10:30:45 UTC
This bug appears to have been reported against 'rawhide' during the Fedora 26 development cycle.
Changing version to '26'.

Comment 5 Dan Horák 2017-07-12 12:18:52 UTC
Upstream has fixed the ppc specific issues in all active branches, so with updated packages we can drop the workaround.

Comment 6 Fedora End Of Life 2018-05-03 08:18:08 UTC
This message is a reminder that Fedora 26 is nearing its end of life.
Approximately 4 (four) weeks from now Fedora will stop maintaining
and issuing updates for Fedora 26. It is Fedora's policy to close all
bug reports from releases that are no longer maintained. At that time
this bug will be closed as EOL if it remains open with a Fedora  'version'
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