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Bug 1841811
| Summary: | sagemath fails to build and install: fatal error: gap/system.h: No such file or directory | ||
|---|---|---|---|
| Product: | [Fedora] Fedora | Reporter: | Igor Raits <igor.raits> |
| Component: | sagemath | Assignee: | Paulo Andrade <paulo.cesar.pereira.de.andrade> |
| Status: | CLOSED RAWHIDE | QA Contact: | Fedora Extras Quality Assurance <extras-qa> |
| Severity: | unspecified | Docs Contact: | |
| Priority: | unspecified | ||
| Version: | rawhide | CC: | mhroncok, paulo.cesar.pereira.de.andrade |
| Target Milestone: | --- | ||
| Target Release: | --- | ||
| Hardware: | Unspecified | ||
| OS: | Unspecified | ||
| Whiteboard: | |||
| Fixed In Version: | sagemath-9.1-1.fc33 | Doc Type: | If docs needed, set a value |
| Doc Text: | Story Points: | --- | |
| Clone Of: | Environment: | ||
| Last Closed: | 2020-07-11 23:42:34 UTC | Type: | --- |
| Regression: | --- | Mount Type: | --- |
| Documentation: | --- | CRM: | |
| Verified Versions: | Category: | --- | |
| oVirt Team: | --- | RHEL 7.3 requirements from Atomic Host: | |
| Cloudforms Team: | --- | Target Upstream Version: | |
| Embargoed: | |||
| Bug Depends On: | |||
| Bug Blocks: | 1785415, 1803234 | ||
|
Description
Igor Raits
2020-05-29 14:38:59 UTC
Hello, This is the first reminder (step 3 from https://docs.fedoraproject.org/en-US/fesco/Fails_to_build_from_source_Fails_to_install/#_package_removal_for_long_standing_ftbfs_and_fti_bugs). If you know about this problem and are planning on fixing it, please acknowledge so by setting the bug status to ASSIGNED. If you don't have time to maintain this package, consider orphaning it, so maintainers of dependent packages realize the problem. This was blocked by some dependencies but no longer is so. Attempting a rebuild. gcc -pthread -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -g -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-i686-3.9/build/cythonized/sage/schemes/toric/divisor_class.o -L/builddir/build/BUILDROOT/sagemath-9.0-8.fc33.i386/usr/lib/sagemath/local/lib -L/usr/lib -lgmp -o build/lib.linux-i686-3.9/sage/schemes/toric/divisor_class.cpython-39-i386-linux-gnu.so
[471/510] creating build/temp.linux-i686-3.9/build/cythonized/sage/sets
gcc -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I./sage/groups/perm_gps/partn_ref2 -I./sage/cpython -I/usr/include -I/builddir/build/BUILD/sage-9.0/src -I/builddir/build/BUILD/sage-9.0/src/sage/ext -I/usr/include/python3.9 -I/usr/lib/python3.9/site-packages/numpy/core/include -I/usr/lib/python3.9/site-packages/cysignals -Ibuild/cythonized -I/usr/include/python3.9 -c build/cythonized/sage/sets/disjoint_set.c -o build/temp.linux-i686-3.9/build/cythonized/sage/sets/disjoint_set.o -fno-strict-aliasing -DCYTHON_CLINE_IN_TRACEBACK=1 -std=c99
build/cythonized/sage/sets/disjoint_set.c:646:10: fatal error: gap/system.h: No such file or directory
646 | #include "gap/system.h"
| ^~~~~~~~~~~~~~
compilation terminated.
Hello, This is the second reminder (step 4 from https://docs.fedoraproject.org/en-US/fesco/Fails_to_build_from_source_Fails_to_install/#_package_removal_for_long_standing_ftbfs_and_fti_bugs). If you know about this problem and are planning on fixing it, please acknowledge so by setting the bug status to ASSIGNED. If you don't have time to maintain this package, consider orphaning it, so maintainers of dependent packages realize the problem. Hello, Please note that this comment was generated automatically. If you feel that this output has mistakes, please contact me via email (ignatenkobrain). All subpackages of a package against which this bug was filled are now installable or removed from Fedora 33. Thanks for taking care of it! |