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Bug 2122597

Summary:	python-pysam fails to build: mising sources, patch does not apply
Product:	[Fedora] Fedora	Reporter:	Miro Hrončok <mhroncok>
Component:	python-pysam	Assignee:	david08741
Status:	CLOSED ERRATA	QA Contact:	Fedora Extras Quality Assurance <extras-qa>
Severity:	unspecified	Docs Contact:
Priority:	unspecified
Version:	37	CC:	david08741, thrnciar
Target Milestone:	---
Target Release:	---
Hardware:	Unspecified
OS:	Unspecified
Whiteboard:
Fixed In Version:	python-pysam-0.19.1-3.fc37	Doc Type:	If docs needed, set a value
Doc Text:		Story Points:	---
Clone Of:		Environment:
Last Closed:	2022-09-12 17:43:27 UTC	Type:	Bug
Regression:	---	Mount Type:	---
Documentation:	---	CRM:
Verified Versions:		Category:	---
oVirt Team:	---	RHEL 7.3 requirements from Atomic Host:
Cloudforms Team:	---	Target Upstream Version:
Embargoed:
Bug Depends On:
Bug Blocks:	2117176, 2045102, 2107826

Description Miro Hrončok 2022-08-30 11:09:52 UTC

The python-pysam package was updated from 0.19.0 to 0.19.1 in this unrelated commit https://src.fedoraproject.org/rpms/python-pysam/c/a9b44ddba555203965a2912db4a878491e74465e?branch=rawhide

The source tarball wass not uploaded with fepdkg new-sources.

Even when fetched from https://files.pythonhosted.org/packages/source/p/pysam/pysam-0.19.1.tar.gz the build fails with:

Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Sc9GHQ
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf pysam-0.19.1
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/pysam-0.19.1.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd pysam-0.19.1
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/b2194969ba42cbec0ebc4960bf1a64c96b19acad.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
1 out of 1 hunk FAILED -- saving rejects to file setup.py.rej
error: Bad exit status from /var/tmp/rpm-tmp.Sc9GHQ (%prep)

RPM build errors:
    Bad exit status from /var/tmp/rpm-tmp.Sc9GHQ (%prep)




=================

PYC magic number has changed in Python 3.11.0b4, and all packages with Python
bytecode need to be rebuilt. Most of them were rebuilt during the Fedora 37 mass rebuild, but since this package is FTBFS, we were hoping you could fix it and rebuild it manually, or it will cause subtle issues when used.

Tracking bugzilla for all affected packages:
https://bugzilla.redhat.com/show_bug.cgi?id=2107826

Please, fix this and rebuild the package on Fedora 37 and 38.

Comment 1 Fedora Update System 2022-08-30 20:56:37 UTC

FEDORA-2022-d1c0a0a6f9 has been submitted as an update to Fedora 37. https://bodhi.fedoraproject.org/updates/FEDORA-2022-d1c0a0a6f9

Comment 2 david08741 2022-08-30 20:58:07 UTC

F38: https://bodhi.fedoraproject.org/updates/FEDORA-2022-41fea3b6c0

Comment 3 Fedora Update System 2022-08-31 02:22:17 UTC

FEDORA-2022-d1c0a0a6f9 has been pushed to the Fedora 37 testing repository.
Soon you'll be able to install the update with the following command:
`sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2022-d1c0a0a6f9`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2022-d1c0a0a6f9

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 4 Fedora Update System 2022-09-12 17:43:27 UTC

FEDORA-2022-d1c0a0a6f9 has been pushed to the Fedora 37 stable repository.
If problem still persists, please make note of it in this bug report.