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Bug 2128289
| Summary: | Please port your pcre dependency to pcre2. Pcre has been deprecated | ||
|---|---|---|---|
| Product: | [Fedora] Fedora | Reporter: | Lukas Javorsky <ljavorsk> |
| Component: | EMBOSS | Assignee: | Tom "spot" Callaway <spotrh> |
| Status: | CLOSED ERRATA | QA Contact: | Fedora Extras Quality Assurance <extras-qa> |
| Severity: | unspecified | Docs Contact: | |
| Priority: | unspecified | ||
| Version: | rawhide | CC: | admin, fweimer, spotrh |
| Target Milestone: | --- | ||
| Target Release: | --- | ||
| Hardware: | Unspecified | ||
| OS: | Unspecified | ||
| Whiteboard: | |||
| Fixed In Version: | EMBOSS-6.6.0-26.fc38 EMBOSS-6.6.0-26.fc39 | Doc Type: | If docs needed, set a value |
| Doc Text: | Story Points: | --- | |
| Clone Of: | Environment: | ||
| Last Closed: | 2022-09-20 17:15:13 UTC | Type: | --- |
| Regression: | --- | Mount Type: | --- |
| Documentation: | --- | CRM: | |
| Verified Versions: | Category: | --- | |
| oVirt Team: | --- | RHEL 7.3 requirements from Atomic Host: | |
| Cloudforms Team: | --- | Target Upstream Version: | |
| Embargoed: | |||
| Bug Depends On: | |||
| Bug Blocks: | 2127507 | ||
|
Description
Lukas Javorsky
2022-09-20 12:53:23 UTC
Adding blocking relationship to BZ 2127507 (the Change tracker) Ported to pcre2 in EMBOSS-6.6.0-22.fc38 With the EMBOSS-6.6.0-pcre2.patch included we get most (all?) EMBOSS programs producing a Segmentation fault (core dumped). During the build I see the following warnings:
ajreg.c:157:81: warning: passing argument 4 of 'pcre2_compile_8' from incompatible pointer type [-Wincompatible-pointer-types]
ret->pcre = pcre2_compile((PCRE2_SPTR)rexp, PCRE2_ZERO_TERMINATED, options, &errptr, &errpos, tableptr);
^~~~~~~
In file included from ajreg.h:46,
from ajreg.c:34:
/usr/include/pcre2.h:916:1: note: expected 'int *' but argument is of type 'const char **'
PCRE2_TYPES_STRUCTURES_AND_FUNCTIONS
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ajreg.c:157:90: warning: passing argument 5 of 'pcre2_compile_8' from incompatible pointer type [-Wincompatible-pointer-types]
ret->pcre = pcre2_compile((PCRE2_SPTR)rexp, PCRE2_ZERO_TERMINATED, options, &errptr, &errpos, tableptr);
^~~~~~~
In file included from ajreg.h:46,
from ajreg.c:34:
/usr/include/pcre2.h:916:1: note: expected 'size_t *' {aka 'long unsigned int *'} but argument is of type 'int *'
PCRE2_TYPES_STRUCTURES_AND_FUNCTIONS
Would it be possible for this be looked at again? We're happy to run without the patch here for now...
The crash was also failed as bug 2242051. GCC 14 will refuse to build EMBOSS because of related type errors. FEDORA-2023-4583e503b9 has been submitted as an update to Fedora 38. https://bodhi.fedoraproject.org/updates/FEDORA-2023-4583e503b9 FEDORA-2023-f5e1cc77de has been submitted as an update to Fedora 39. https://bodhi.fedoraproject.org/updates/FEDORA-2023-f5e1cc77de FEDORA-2023-4583e503b9 has been pushed to the Fedora 38 testing repository. Soon you'll be able to install the update with the following command: `sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2023-4583e503b9` You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2023-4583e503b9 See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates. FEDORA-2023-f5e1cc77de has been pushed to the Fedora 39 testing repository. Soon you'll be able to install the update with the following command: `sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2023-f5e1cc77de` You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2023-f5e1cc77de See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates. FEDORA-2023-4583e503b9 has been pushed to the Fedora 38 stable repository. If problem still persists, please make note of it in this bug report. FEDORA-2023-f5e1cc77de has been pushed to the Fedora 39 stable repository. If problem still persists, please make note of it in this bug report. |