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Bug 1958976 - python-scikit-learn fails to build with Python 3.10: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘use_tracing’; did you mean ‘tracing’?
Summary: python-scikit-learn fails to build with Python 3.10: error: ‘PyThreadState’ {...
Alias: None
Product: Fedora
Classification: Fedora
Component: python-scikit-learn
Version: rawhide
Hardware: Unspecified
OS: Unspecified
Target Milestone: ---
Assignee: Sergio Pascual
QA Contact: Fedora Extras Quality Assurance
Depends On:
Blocks: PYTHON3.10
TreeView+ depends on / blocked
Reported: 2021-05-10 14:16 UTC by Miro Hrončok
Modified: 2021-05-19 11:07 UTC (History)
6 users (show)

Fixed In Version:
Doc Type: If docs needed, set a value
Doc Text:
Clone Of:
Last Closed: 2021-05-19 11:07:55 UTC
Type: Bug

Attachments (Terms of Use)

Description Miro Hrončok 2021-05-10 14:16:52 UTC
python-scikit-learn fails to build with Python 3.10.0b1:

gcc: sklearn/cluster/_k_means_fast.c
In file included from /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1944,
                 from /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from sklearn/cluster/_k_means_fast.c:635:
/usr/lib64/python3.10/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
sklearn/cluster/_k_means_fast.c: In function ‘__Pyx_call_return_trace_func’:
sklearn/cluster/_k_means_fast.c:1596:15: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘use_tracing’; did you mean ‘tracing’?
 1596 |       tstate->use_tracing = 0;
      |               ^~~~~~~~~~~
      |               tracing
sklearn/cluster/_k_means_fast.c:1602:15: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘use_tracing’; did you mean ‘tracing’?
 1602 |       tstate->use_tracing = 1;
      |               ^~~~~~~~~~~
      |               tracing

For the build logs, see:

For all our attempts to build python-scikit-learn with Python 3.10, see:

Testing and mass rebuild of packages is happening in copr. You can follow these instructions to test locally in mock if your package builds with Python 3.10:

Let us know here if you have any questions.

Python 3.10 will be included in Fedora 35. To make that update smoother, we're building Fedora packages with early pre-releases of Python 3.10.
A build failure prevents us from testing all dependent packages (transitive [Build]Requires), so if this package is required a lot, it's important for us to get it fixed soon.
We'd appreciate help from the people who know this package best, but if you don't want to work on this now, let us know so we can try to work around it on our side.

Comment 1 Miro Hrončok 2021-05-10 14:17:30 UTC
Note that I think this is a regression in Python:

Comment 2 Miro Hrončok 2021-05-10 14:21:12 UTC
The usage comes from

Comment 3 Miro Hrončok 2021-05-19 11:07:55 UTC
Fixed in

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