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Bug 228970

Summary: Review Request: elph - Tool to find motifs in a set of DNA or protein sequences
Product: [Fedora] Fedora Reporter: Christian Iseli <Christian.Iseli>
Component: Package ReviewAssignee: Parag AN(पराग) <panemade>
Status: CLOSED NEXTRELEASE QA Contact: Fedora Package Reviews List <fedora-package-review>
Severity: medium Docs Contact:
Priority: medium    
Version: rawhideFlags: panemade: fedora-review+
dennis: fedora-cvs+
Target Milestone: ---   
Target Release: ---   
Hardware: All   
OS: Linux   
Fixed In Version: Doc Type: Bug Fix
Doc Text:
Story Points: ---
Clone Of: Environment:
Last Closed: 2007-02-24 00:19:48 UTC Type: ---
Regression: --- Mount Type: ---
Documentation: --- CRM:
Verified Versions: Category: ---
oVirt Team: --- RHEL 7.3 requirements from Atomic Host:
Cloudforms Team: --- Target Upstream Version:
Bug Depends On:    
Bug Blocks: 163779, 228971    

Description Christian Iseli 2007-02-16 10:16:36 UTC
Spec URL:
ELPH is a general-purpose Gibbs sampler for finding motifs in a set of
DNA or protein sequences. The program takes as input a set containing
anywhere from a few dozen to thousands of sequences, and searches
through them for the most common motif, assuming that each sequence
contains one copy of the motif.

Comment 1 Parag AN(पराग) 2007-02-22 09:59:34 UTC
+ package builds in mock (development i386).
+ rpmlint is silent for SRPM and RPM
+ source files match upstream.
eb96b4dde3ab12ba1f31a4230a829ff3  ELPH-1.0.1.tar.gz
+ package meets naming and packaging guidelines.
+ specfile is properly named, is cleanly written
+ Spec file is written in American English.
+ Spec file is legible.
+ dist tag is present.
+ build root is correct.
+ license is open source-compatible.
+ License text is included in package.
+ %doc is small; no -doc subpackage required.
+ %doc does not affect runtime.
+ BuildRequires are proper.
+ %clean is present.
+ package installed properly.
+ Macro use appears rather consistent.
+ Package contains code, not content.
+ no headers or static libraries.
+ no .pc file present.
+ no -devel subpackage exists.
+ no .la files.
+ no translations are available.
+ Does owns the directories it creates.
+ no duplicates in %files.
+ file permissions are appropriate.


Comment 2 Christian Iseli 2007-02-22 13:22:31 UTC
New Package CVS Request
Package Name: elph
Short Description: Tool to find motifs in a set of DNA or protein sequences
Owners: Christian.Iseli
Branches: FC-5 FC-6 devel

Comment 3 Dennis Gilmore 2007-02-22 13:37:08 UTC

For the reviewer please set the fedora-review flag

Comment 4 Christian Iseli 2007-02-24 00:19:48 UTC
Imported and built.

Thanks Parag for the review :-)