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Bug 1843804 - FTBFS: Cython fails 2 tests with numpy 1.19
Summary: FTBFS: Cython fails 2 tests with numpy 1.19
Keywords:
Status: CLOSED RAWHIDE
Alias: None
Product: Fedora
Classification: Fedora
Component: Cython
Version: rawhide
Hardware: Unspecified
OS: Unspecified
unspecified
unspecified
Target Milestone: ---
Assignee: Igor Raits
QA Contact: Fedora Extras Quality Assurance
URL: https://koschei.fedoraproject.org/pac...
Whiteboard:
Depends On:
Blocks: F33FTBFS 1859435
TreeView+ depends on / blocked
 
Reported: 2020-06-04 07:54 UTC by Miro Hrončok
Modified: 2020-07-22 22:36 UTC (History)
6 users (show)

Fixed In Version:
Doc Type: If docs needed, set a value
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Clone Of:
Environment:
Last Closed: 2020-07-22 20:50:41 UTC
Type: Bug
Embargoed:

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System ID Private Priority Status Summary Last Updated
Github cython cython issues 3750 0 None open Build issue with numpy 1.19.x 2020-07-22 15:35:26 UTC

Description Miro Hrončok 2020-06-04 07:54:02 UTC 
Description of problem:
Package Cython fails to build from source in Fedora rawhide due to reent update of numpy to 1.19.

======================================================================
ERROR: runTest (__main__.CythonRunTestCase)
compiling (c) and running numpy_test
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/cython-0.29.19/runtests.py", line 1247, in run
    ext_so_path = self.runCompileTest()
  File "/builddir/build/BUILD/cython-0.29.19/runtests.py", line 923, in runCompileTest
    return self.compile(
  File "/builddir/build/BUILD/cython-0.29.19/runtests.py", line 1168, in compile
    self._match_output(expected_errors, errors, tostderr)
  File "/builddir/build/BUILD/cython-0.29.19/runtests.py", line 1217, in _match_output
    self.assertEqual(None, unexpected)
AssertionError: None != "962:69: Cannot convert 'void *' to Python object"
======================================================================
ERROR: runTest (__main__.CythonRunTestCase)
compiling (cpp) and running numpy_test
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/builddir/build/BUILD/cython-0.29.19/runtests.py", line 1247, in run
    ext_so_path = self.runCompileTest()
  File "/builddir/build/BUILD/cython-0.29.19/runtests.py", line 923, in runCompileTest
    return self.compile(
  File "/builddir/build/BUILD/cython-0.29.19/runtests.py", line 1168, in compile
    self._match_output(expected_errors, errors, tostderr)
  File "/builddir/build/BUILD/cython-0.29.19/runtests.py", line 1217, in _match_output
    self.assertEqual(None, unexpected)
AssertionError: None != "962:69: Cannot convert 'void *' to Python object"
----------------------------------------------------------------------
Ran 2281 tests in 992.989s
FAILED (errors=2, skipped=6)


Version-Release number of selected component (if applicable):
0.29.19-1.fc33



Additional info:
This package is tracked by Koschei. See:
https://koschei.fedoraproject.org/package/Cython
Comment 1 Gwyn Ciesla 2020-07-22 15:35:26 UTC 
Updated to 0.29.21, same problem. numpy 1.19.1 needs 0.29.21. Submitted upstream.
Comment 2 Miro Hrončok 2020-07-22 16:47:28 UTC 
There is a bcond to disable the tests, and the numpy related tests can be skipped, please, don't comment out the entire %check section.
Comment 3 Gwyn Ciesla 2020-07-22 16:54:32 UTC 
Successfully built without tests to build numpy 1.19.1. Will re-enable afterward if that works.
Comment 4 Gwyn Ciesla 2020-07-22 16:55:01 UTC 
Sorry I missed that, I'll correct that if I can't re-enable.
Comment 5 Miro Hrončok 2020-07-22 17:07:56 UTC 
> the numpy related tests can be skipped

Working on that.
Comment 6 Miro Hrončok 2020-07-22 17:09:08 UTC 
I see, crossed wires, sorry.

Never mind, if you can reenable all tests, please do it. If not, temporary drop BR on numpy.
Comment 7 Gwyn Ciesla 2020-07-22 17:10:16 UTC 
Will do. :)
Comment 8 Miro Hrončok 2020-07-22 22:36:14 UTC 
Thank You, Gwyn!
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