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Bug 2220277 - F39FailsToInstall: python3-indexed-gzip
Summary: F39FailsToInstall: python3-indexed-gzip
Keywords:
Status: CLOSED ERRATA
Alias: None
Product: Fedora
Classification: Fedora
Component: python-indexed_gzip
Version: rawhide
Hardware: Unspecified
OS: Unspecified
unspecified
unspecified
Target Milestone: ---
Assignee: Ben Beasley
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On: 2220356
Blocks: F39FailsToInstall PYTHON3.12 2220241 2220242 2220243
TreeView+ depends on / blocked
 
Reported: 2023-07-05 19:13 UTC by Fedora Fails To Install
Modified: 2023-07-11 18:03 UTC (History)
3 users (show)

Fixed In Version: python-indexed_gzip-1.7.1-5.fc39
Doc Type: If docs needed, set a value
Doc Text:
Clone Of:
Environment:
Last Closed: 2023-07-11 18:03:54 UTC
Type: ---
Embargoed:

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System ID Private Priority Status Summary Last Updated
Github pauldmccarthy indexed_gzip issues 125 0 None open Regressions on Python 3.12: TypeError: cannot pickle 'IndexedGzipFile' instances 2023-07-11 16:47:58 UTC

Description Fedora Fails To Install 2023-07-05 19:13:32 UTC 
Hello,

Please note that this comment was generated automatically by https://pagure.io/releng/blob/main/f/scripts/ftbfs-fti/follow-policy.py
If you feel that this output has mistakes, please open an issue at https://pagure.io/releng/

Your package (python-indexed_gzip) Fails To Install in Fedora 39:

can't install python3-indexed-gzip:
  - nothing provides python(abi) = 3.11 needed by python3-indexed-gzip-1.7.1-1.fc39.x86_64
  
If you know about this problem and are planning on fixing it, please acknowledge so by setting the bug status to ASSIGNED. If you don't have time to maintain this package, consider orphaning it, so maintainers of dependent packages realize the problem.


If you don't react accordingly to the policy for FTBFS/FTI bugs (https://docs.fedoraproject.org/en-US/fesco/Fails_to_build_from_source_Fails_to_install/), your package may be orphaned in 8+ weeks.


P.S. The data was generated solely from koji buildroot, so it might be newer than the latest compose or the content on mirrors. To reproduce, use the koji/local repo only, e.g. in mock:

    $ mock -r fedora-39-x86_64 --config-opts mirrored=False install python3-indexed-gzip


P.P.S. If this bug has been reported in the middle of upgrading multiple dependent packages, please consider using side tags: https://docs.fedoraproject.org/en-US/fesco/Updates_Policy/#updating-inter-dependent-packages

Thanks!
Comment 1 Ben Beasley 2023-07-11 15:14:29 UTC 
The Python 3.12 rebuild was blocked by a test dependency on nibabel. I conditionalized the nibabel BR and integration tests, and temporarily disabled them until bug 2220356 is fixed.

Now there are three test failures:

=========================== short test summary info ============================
FAILED ../../BUILDROOT/python-indexed_gzip-1.7.1-3.fc39.x86_64/usr/lib64/python3.12/site-packages/indexed_gzip/tests/test_indexed_gzip.py::test_multiproc_serialise
FAILED ../../BUILDROOT/python-indexed_gzip-1.7.1-3.fc39.x86_64/usr/lib64/python3.12/site-packages/indexed_gzip/tests/test_indexed_gzip.py::test_picklable
FAILED ../../BUILDROOT/python-indexed_gzip-1.7.1-3.fc39.x86_64/usr/lib64/python3.12/site-packages/indexed_gzip/tests/test_indexed_gzip.py::test_copyable
===== 3 failed, 86 passed, 1 skipped, 35597 warnings in 520.36s (0:08:40) ======

Each is due to:

E       TypeError: cannot pickle 'IndexedGzipFile' instances
Comment 2 Ben Beasley 2023-07-11 16:47:59 UTC 
Reported upstream: https://github.com/pauldmccarthy/indexed_gzip/issues/125

I think I have a patch for this. Waiting for the test suite in a local mock build.
Comment 3 Fedora Update System 2023-07-11 18:01:01 UTC 
FEDORA-2023-172aef0d5b has been submitted as an update to Fedora 39. https://bodhi.fedoraproject.org/updates/FEDORA-2023-172aef0d5b
Comment 4 Fedora Update System 2023-07-11 18:03:54 UTC 
FEDORA-2023-172aef0d5b has been pushed to the Fedora 39 stable repository.
If problem still persists, please make note of it in this bug report.
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