Note: This is a public test instance of Red Hat Bugzilla. The data contained within is a snapshot of the live data so any changes you make will not be reflected in the production Bugzilla. Email is disabled so feel free to test any aspect of the site that you want. File any problems you find or give feedback at bugzilla.redhat.com.
Bug 2255783 - Review Request: python-conda-inject - Inject a conda environment into the current python environment
Summary: Review Request: python-conda-inject - Inject a conda environment into the cur...
Keywords:
Status: CLOSED ERRATA
Alias: None
Product: Fedora
Classification: Fedora
Component: Package Review
Version: rawhide
Hardware: All
OS: Linux
medium
medium
Target Milestone: ---
Assignee: Sandro
QA Contact: Fedora Extras Quality Assurance
URL: https://github.com/koesterlab/conda-i...
Whiteboard: Trivial
Depends On:
Blocks: fedora-neuro, NeuroFedora 2255578
TreeView+ depends on / blocked
 
Reported: 2023-12-25 02:00 UTC by Ben Beasley
Modified: 2024-01-04 02:06 UTC (History)
2 users (show)

Fixed In Version:
Doc Type: If docs needed, set a value
Doc Text:
Clone Of:
Environment:
Last Closed: 2023-12-26 13:39:10 UTC
Type: ---
Embargoed:
gui1ty: fedora-review+


Attachments (Terms of Use)

Description Ben Beasley 2023-12-25 02:00:03 UTC
Spec URL: https://music.fedorapeople.org/python-conda-inject.spec
SRPM URL: https://music.fedorapeople.org/python-conda-inject-1.3.1-1.fc39.src.rpm

Description:

Helper functions for injecting a conda environment into the current python
environment. This happens by modifying sys.path, without actually changing the
current python environment.

Fedora Account System Username: music

Koji scratch builds:

F40: https://koji.fedoraproject.org/koji/taskinfo?taskID=110808419
F39: https://koji.fedoraproject.org/koji/taskinfo?taskID=110808437
F38: https://koji.fedoraproject.org/koji/taskinfo?taskID=110808466

This is a new dependency for snakemake 8.0. It will be a neuro-sig package.

Comment 1 Fedora Review Service 2023-12-25 08:17:21 UTC
Copr build:
https://copr.fedorainfracloud.org/coprs/build/6813959
(succeeded)

Review template:
https://download.copr.fedorainfracloud.org/results/@fedora-review/fedora-review-2255783-python-conda-inject/fedora-rawhide-x86_64/06813959-python-conda-inject/fedora-review/review.txt

Please take a look if any issues were found.


---
This comment was created by the fedora-review-service
https://github.com/FrostyX/fedora-review-service

If you want to trigger a new Copr build, add a comment containing new
Spec and SRPM URLs or [fedora-review-service-build] string.

Comment 2 Sandro 2023-12-26 12:08:23 UTC
Info
====

[x]: %check is present and all tests pass.

=> How many snakes does it take to make Python developers happy? ;)

Package is APPROVED.

Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated
[ ] = Manual review needed



===== MUST items =====

Generic:
[x]: Package successfully compiles and builds into binary rpms on at least
     one supported primary architecture.
[x]: Package is licensed with an open-source compatible license and meets
     other legal requirements as defined in the legal section of Packaging
     Guidelines.
[x]: License field in the package spec file matches the actual license.
[x]: Package contains no bundled libraries without FPC exception.
[x]: Changelog in prescribed format.
[x]: Sources contain only permissible code or content.
[-]: Package contains desktop file if it is a GUI application.
[-]: Development files must be in a -devel package
[x]: Package uses nothing in %doc for runtime.
[x]: Package consistently uses macros (instead of hard-coded directory
     names).
[x]: Package is named according to the Package Naming Guidelines.
[x]: Package does not generate any conflict.
[x]: Package obeys FHS, except libexecdir and /usr/target.
[-]: If the package is a rename of another package, proper Obsoletes and
     Provides are present.
[x]: Requires correct, justified where necessary.
[x]: Spec file is legible and written in American English.
[-]: Package contains systemd file(s) if in need.
[x]: Package is not known to require an ExcludeArch tag.
[-]: Large documentation must go in a -doc subpackage. Large could be size
     (~1MB) or number of files.
     Note: Documentation size is 10501 bytes in 2 files.
[x]: Package complies to the Packaging Guidelines
[x]: Package installs properly.
[x]: Rpmlint is run on all rpms the build produces.
     Note: No rpmlint messages.
[x]: If (and only if) the source package includes the text of the
     license(s) in its own file, then that file, containing the text of the
     license(s) for the package is included in %license.
[x]: The License field must be a valid SPDX expression.
[x]: Package requires other packages for directories it uses.
[x]: Package must own all directories that it creates.
[x]: Package does not own files or directories owned by other packages.
[x]: Package uses either %{buildroot} or $RPM_BUILD_ROOT
[x]: Package does not run rm -rf %{buildroot} (or $RPM_BUILD_ROOT) at the
     beginning of %install.
[x]: Macros in Summary, %description expandable at SRPM build time.
[x]: Dist tag is present.
[x]: Package does not contain duplicates in %files.
[x]: Permissions on files are set properly.
[x]: Package must not depend on deprecated() packages.
[x]: Package use %makeinstall only when make install DESTDIR=... doesn't
     work.
[x]: Package is named using only allowed ASCII characters.
[x]: Package does not use a name that already exists.
[x]: Package is not relocatable.
[x]: Sources used to build the package match the upstream source, as
     provided in the spec URL.
[x]: Spec file name must match the spec package %{name}, in the format
     %{name}.spec.
[x]: File names are valid UTF-8.
[x]: Packages must not store files under /srv, /opt or /usr/local

Python:
[-]: Python eggs must not download any dependencies during the build
     process.
[-]: A package which is used by another package via an egg interface should
     provide egg info.
[x]: Package meets the Packaging Guidelines::Python
[x]: Package contains BR: python2-devel or python3-devel
[x]: Packages MUST NOT have dependencies (either build-time or runtime) on
     packages named with the unversioned python- prefix unless no properly
     versioned package exists. Dependencies on Python packages instead MUST
     use names beginning with python2- or python3- as appropriate.
[x]: Python packages must not contain %{pythonX_site(lib|arch)}/* in %files
[x]: Binary eggs must be removed in %prep

===== SHOULD items =====

Generic:
[x]: Reviewer should test that the package builds in mock.
[-]: If the source package does not include license text(s) as a separate
     file from upstream, the packager SHOULD query upstream to include it.
[x]: Final provides and requires are sane (see attachments).
[?]: Package functions as described.
[x]: Latest version is packaged.
[x]: Package does not include license text files separate from upstream.
[-]: Sources are verified with gpgverify first in %prep if upstream
     publishes signatures.
[x]: Package should compile and build into binary rpms on all supported
     architectures.
[x]: %check is present and all tests pass.
[x]: Packages should try to preserve timestamps of original installed
     files.
[x]: Buildroot is not present
[x]: Package has no %clean section with rm -rf %{buildroot} (or
     $RPM_BUILD_ROOT)
[x]: No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: Packager, Vendor, PreReq, Copyright tags should not be in spec file
[x]: Sources can be downloaded from URI in Source: tag
[x]: SourceX is a working URL.
[x]: Spec use %global instead of %define unless justified.

===== EXTRA items =====

Generic:
[x]: Rpmlint is run on all installed packages.
     Note: No rpmlint messages.


Rpmlint
-------
Checking: python3-conda-inject-1.3.1-1.fc38.noarch.rpm
          python-conda-inject-1.3.1-1.fc38.src.rpm
============================ rpmlint session starts ============================
rpmlint: 2.4.0
configuration:
    /usr/lib/python3.11/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora-legacy-licenses.toml
    /etc/xdg/rpmlint/fedora-spdx-licenses.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
rpmlintrc: [PosixPath('/tmp/tmpte45v22k')]
checks: 31, packages: 2

 2 packages and 0 specfiles checked; 0 errors, 0 warnings, 0 badness; has taken 0.1 s 




Rpmlint (installed packages)
----------------------------
(none): E: there is no installed rpm "python3-conda-inject".
There are no files to process nor additional arguments.
Nothing to do, aborting.
============================ rpmlint session starts ============================
rpmlint: 2.4.0
configuration:
    /usr/lib/python3.11/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora-legacy-licenses.toml
    /etc/xdg/rpmlint/fedora-spdx-licenses.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
checks: 31, packages: 1

 0 packages and 0 specfiles checked; 0 errors, 0 warnings, 0 badness; has taken 0.0 s 



Source checksums
----------------
https://github.com/koesterlab/conda-inject/archive/v1.3.1/conda-inject-1.3.1.tar.gz :
  CHECKSUM(SHA256) this package     : 4ec172cdea816dd78fda95cab34227c9f0c360cd80adc5fa7b60fdb6c3c85cab
  CHECKSUM(SHA256) upstream package : 4ec172cdea816dd78fda95cab34227c9f0c360cd80adc5fa7b60fdb6c3c85cab


Requires
--------
python3-conda-inject (rpmlib, GLIBC filtered):
    (python3.11dist(pyyaml) < 7~~ with python3.11dist(pyyaml) >= 6)
    python(abi)



Provides
--------
python3-conda-inject:
    python-conda-inject
    python3-conda-inject
    python3.11-conda-inject
    python3.11dist(conda-inject)
    python3dist(conda-inject)



Generated by fedora-review 0.10.0 (e79b66b) last change: 2023-07-24
Command line :/bin/fedora-review --no-colors --prebuilt --rpm-spec --name python-conda-inject --mock-config /var/lib/copr-rpmbuild/results/configs/child.cfg
Buildroot used: fedora-38-x86_64
Active plugins: Python, Shell-api, Generic
Disabled plugins: Perl, PHP, Java, C/C++, fonts, Haskell, SugarActivity, Ocaml, R
Disabled flags: EXARCH, EPEL6, EPEL7, DISTTAG, BATCH

Comment 3 Ben Beasley 2023-12-26 13:23:59 UTC
Thank you for the review!

Comment 4 Fedora Admin user for bugzilla script actions 2023-12-26 13:24:30 UTC
The Pagure repository was created at https://src.fedoraproject.org/rpms/python-conda-inject

Comment 5 Ben Beasley 2023-12-26 13:29:39 UTC
https://release-monitoring.org/project/362603/

Comment 6 Fedora Update System 2023-12-26 13:38:30 UTC
FEDORA-2023-3def84f29e has been submitted as an update to Fedora 40. https://bodhi.fedoraproject.org/updates/FEDORA-2023-3def84f29e

Comment 7 Fedora Update System 2023-12-26 13:39:10 UTC
FEDORA-2023-3def84f29e has been pushed to the Fedora 40 stable repository.
If problem still persists, please make note of it in this bug report.

Comment 8 Ben Beasley 2023-12-26 13:50:05 UTC
I won’t build this for EPEL9 because a newer PyYAML is required.

Comment 9 Fedora Update System 2023-12-26 14:28:50 UTC
FEDORA-2023-524422d73f has been submitted as an update to Fedora 39. https://bodhi.fedoraproject.org/updates/FEDORA-2023-524422d73f

Comment 10 Fedora Update System 2023-12-26 14:28:59 UTC
FEDORA-2023-336a69b3a6 has been submitted as an update to Fedora 38. https://bodhi.fedoraproject.org/updates/FEDORA-2023-336a69b3a6

Comment 11 Fedora Update System 2023-12-27 02:10:27 UTC
FEDORA-2023-336a69b3a6 has been pushed to the Fedora 38 testing repository.
Soon you'll be able to install the update with the following command:
`sudo dnf install --enablerepo=updates-testing --refresh --advisory=FEDORA-2023-336a69b3a6 \*`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2023-336a69b3a6

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 12 Fedora Update System 2023-12-27 02:20:20 UTC
FEDORA-2023-524422d73f has been pushed to the Fedora 39 testing repository.
Soon you'll be able to install the update with the following command:
`sudo dnf install --enablerepo=updates-testing --refresh --advisory=FEDORA-2023-524422d73f \*`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2023-524422d73f

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 13 Fedora Update System 2024-01-04 01:38:08 UTC
FEDORA-2023-336a69b3a6 has been pushed to the Fedora 38 stable repository.
If problem still persists, please make note of it in this bug report.

Comment 14 Fedora Update System 2024-01-04 02:06:08 UTC
FEDORA-2023-524422d73f has been pushed to the Fedora 39 stable repository.
If problem still persists, please make note of it in this bug report.


Note You need to log in before you can comment on or make changes to this bug.